ATO income tax debt

Paying a business income tax debt

A strong year can leave a large tax bill, often just as PAYG instalments rise for the year ahead. Here's how to handle it.

  • Separate from GST and PAYG withholding debts.
  • GIC applies and is no longer tax-deductible.
  • Payment plans and loans can spread or clear it.
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The short answer

A business income tax debt is income tax the ATO has assessed, on a company tax return or a sole trader's or partner's business income, that wasn't paid by the due date. It often follows a profitable year where PAYG instalments were too low, or where cash went into growth before the return was lodged. Income tax debts sit in a separate account from GST and PAYG withholding, so they need their own payment plan. Company income tax isn't one of the amounts covered by the director penalty regime, unlike GST, PAYG withholding and the super guarantee charge, but the ATO can still charge interest, issue garnishee notices and report large overdue business debts to credit bureaus. The general interest charge is 11.51% a year for October to December 2026, compounding daily, and it hasn't been tax-deductible since 1 July 2025 (ATO). Options include a payment plan, a business loan or a property-backed loan.

How do income tax debts arise?

  • A profitable year where PAYG instalments, based on an earlier and smaller year, didn't keep up.
  • Profit reinvested in stock, equipment or staff before the tax was set aside.
  • Late lodgement of several years' returns at once.
  • Amended assessments after an ATO review or a correction.

A sole trader pays tax on business income through their individual return, while a company pays on its own return. Either way, the result is a debt on the income tax account.

How is it different from a GST or PAYG debt?

FeatureCompany income taxGST and PAYG withholding
Covered by the director penalty regimeNoYes
Which ATO accountIncome tax accountActivity statement account
Payment planNeeds its own planA separate plan for the activity statement account
Interest-free small business planNot availableAvailable for some activity statement debts
Garnishee and credit reportingCan applyCan apply

Directors aren't automatically shielded, though. Personal guarantees, trading while insolvent and other liabilities can still create personal risk if the company can't pay its debts.

What does carrying the debt cost?

The general interest charge for October to December 2026 is 11.51% a year, compounding daily, which is about 12.2% over a full year. On a $100,000 income tax debt, that's roughly $12,200 in a year, and none of it is deductible. Interest on a loan used to pay a business tax debt is generally deductible, which narrows the gap between a loan and a payment plan. Read our GIC deductibility guide for the break-even comparison.

What are the options?

  • ATO payment plan. Debts of $200,000 or less can usually be set up online or by phone. Plans longer than two years need a conversation with the ATO.
  • Unsecured business loan. Suits smaller debts where trading supports repayments.
  • Property-backed loan. Suits larger debts, or where the ATO has moved to garnishee notices.
  • A mix. Pay part with a loan and put a shorter plan in place for the rest.

Watch the double hit from PAYG instalments

After a strong year, the ATO usually lifts PAYG instalments for the following year. A business can find itself paying last year's tax and higher instalments for this year at the same time. Instalments can be varied if this year's income will be lower, but varying them too low can attract a general interest charge on the shortfall. Talk to your accountant before varying, and build both payments into any plan or loan.

What do lenders look at?

Lenders want returns lodged, the debt amount confirmed, and evidence the business can meet new tax obligations as well as loan repayments. A recent profitable year often helps the application, because it shows the business can earn. Unpaid debts of $100,000 or more overdue for more than 90 days may already appear on business credit reports if the ATO has disclosed them.

Questions

Income tax debt: common questions

Can a director be personally liable for company income tax?

Company income tax isn't covered by the director penalty regime, unlike GST, PAYG withholding and the super guarantee charge. Directors can still face personal exposure in other ways, such as personal guarantees or insolvent trading claims, so get advice early if the company can't pay its tax.

Can I get a loan to pay income tax as a sole trader?

Often, yes, when the tax relates to business income. Lenders generally treat paying a tax debt arising from the business as a business purpose. Your broker will confirm how the debt arose and that the loan is for the business. Personal tax unrelated to the business is a different matter.

How long can an income tax payment plan run?

The ATO asks businesses to pay in the shortest time they can manage. Plans for debts of $200,000 or less can usually be set up online or through the self-help phone line. Repayment periods beyond two years, or larger debts, need a call to the ATO with details of your finances.

Should I vary my PAYG instalments?

Only with your accountant's input. Varying makes sense when this year's income will be clearly lower than the year the instalment was based on. If you vary too low, the ATO can charge interest on the shortfall. Never vary simply to free up cash.

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